# xMapId	refQry	refId	leftRefBkpt	rightRefBkpt	alignmentOrientation	ref_leftBkpt_toCut	ref_rightBkpt_toCut	ref_toDiscard	refQry	qryId	leftQryBkpt	rightQryBkpt	alignmentOrientation	qry_leftBkpt_toCut	qry_rightBkpt_toCut	qry_toDiscard
# id/-1	ref	id/-1	position/-1	position/-1	+/-	okay/cut/-	okay/cut/-	okay/exclude/-	qry	id/-1	position/-1	position/-1	+/-	okay/cut/-	okay/cut/-	okay/exclude/-
0	ref	33	6383172	-1	+	okay	okay	exclude	qry	10	6453992	-1	+	okay	okay	okay
0	ref	84	16961643	-1	+	okay	okay	exclude	qry	7	1477497	-1	+	okay	okay	okay
0	ref	26	262065	-1	+	cut	okay	okay	qry	10	11157856	-1	+	okay	okay	okay
0	ref	34	17040446	-1	+	okay	okay	exclude	qry	7	1398680	-1	+	okay	okay	okay